STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_002440Uncharacterized protein. (815 aa)    
Predicted Functional Partners:
CAOG_001718
Uncharacterized protein.
    
 0.905
CAOG_001213
Uncharacterized protein.
    
 0.905
CAOG_007371
WD_REPEATS_REGION domain-containing protein.
   
 0.764
CAOG_000388
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 0.719
CAOG_000624
40S ribosomal S14; Belongs to the universal ribosomal protein uS11 family.
    
  0.706
CAOG_008507
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.687
CAOG_007050
Ipi1_N domain-containing protein.
    
 0.687
CAOG_005000
Roc domain-containing protein.
    
 0.673
CAOG_003400
Ribosomal protein rpl30.
    
 0.651
CAOG_003866
60S ribosomal protein L8.
    
 0.639
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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