STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_003462Integral type I protein. (290 aa)    
Predicted Functional Partners:
CAOG_005946
Transmembrane emp24 domain-containing protein.
  
0.974
CAOG_003289
Transmembrane emp24 domain-containing protein 10.
   
0.962
CAOG_004993
GOLD domain-containing protein.
  
0.937
CAOG_003300
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.894
CAOG_001631
Uncharacterized protein.
   
 
 0.893
CAOG_000661
Ribosomal protein S16.
   
   0.891
CAOG_000092
30S ribosomal subunit protein S7; Belongs to the universal ribosomal protein uS7 family.
   
   0.891
CAOG_006718
Ribosomal protein subunit S2.
   
   0.888
CAOG_003771
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.886
CAOG_004101
Uncharacterized protein.
   
   0.881
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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