STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_004098Uncharacterized protein. (182 aa)    
Predicted Functional Partners:
CAOG_006150
V-SNARE coiled-coil homology domain-containing protein.
   
 0.947
CAOG_004455
Vesicle transporter; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.895
CAOG_007836
Vesicle-associated membrane protein; Belongs to the synaptobrevin family.
    
 0.880
CAOG_001804
Soluble NSF attachment protein.
    
 
 0.868
CAOG_006762
Syntaxin-3; Belongs to the syntaxin family.
    
 0.866
CAOG_006622
Syntaxin 1.1; Belongs to the syntaxin family.
    
 0.866
CAOG_006926
DUF2263 domain-containing protein.
    
 0.829
CAOG_006823
t-SNARE coiled-coil homology domain-containing protein.
    
 0.829
CAOG_006273
Uncharacterized protein.
    
 0.822
CAOG_003253
Uncharacterized protein.
    
  0.801
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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