STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_004104Phosphoglycerate-bisphosphoglycerate mutase. (595 aa)    
Predicted Functional Partners:
CAOG_006287
Glycerophosphodiesterase GDE1.
    
 0.881
CAOG_005790
Uncharacterized protein.
    
 0.881
CAOG_007408
Uncharacterized protein; Belongs to the complex I LYR family.
    
 0.869
CAOG_002221
Ribosomal protein L21.
   
   0.867
CAOG_000391
Uncharacterized protein.
    
 0.848
CAOG_003866
60S ribosomal protein L8.
   
 
 0.830
CAOG_003261
Uncharacterized protein.
    
 0.809
CAOG_001809
Ribosomal protein L16a.
   
   0.781
CAOG_003031
Uncharacterized protein.
    
 0.776
CAOG_003184
Ubiquitin-carboxyl extension.
    
  0.775
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.