STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_009786Uncharacterized protein. (536 aa)    
Predicted Functional Partners:
CAOG_008867
Uncharacterized protein.
    
 0.781
CAOG_000619
AGC/NDR/LATS protein kinase.
    
 0.767
CAOG_008578
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.740
CAOG_003184
Ubiquitin-carboxyl extension.
    
 0.704
CAOG_003509
Ubiquitin/ribosomal protein S27a fusion protein.
    
 0.704
CAOG_001243
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein; Belongs to the 14-3-3 family.
    
 0.675
CAOG_005000
Roc domain-containing protein.
    
 0.665
CAOG_008895
TEA domain-containing protein.
    
 0.658
CAOG_004587
Transcriptional enhancer factor isoform 1A.
    
 0.658
CAOG_006225
CENP-T_C domain-containing protein.
    
 0.658
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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