STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_004758WD_REPEATS_REGION domain-containing protein. (440 aa)    
Predicted Functional Partners:
CAOG_001004
Uncharacterized protein.
   
 
 0.817
CAOG_008840
Uncharacterized protein.
    
 
 0.795
CAOG_002502
Uncharacterized protein.
    
 
 0.791
CAOG_005605
Vacuolar protein sorting 53.
    
 
 0.784
CAOG_004079
Vacuolar protein sorting 52.
    
 
 0.721
CAOG_000459
Uncharacterized protein.
      
 0.489
CAOG_002098
BXDC2 protein.
      
 0.407
CAOG_005240
Syntaxin-6.
      
 0.407
CAOG_003754
TPR_REGION domain-containing protein.
      
 0.404
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.