STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_010006Uncharacterized protein. (3100 aa)    
Predicted Functional Partners:
CAOG_005885
Saccharopine dehydrogenase.
   
 
0.717
CAOG_006995
Aminoadipate-semialdehyde dehydrogenase.
  
 
 0.651
CAOG_007212
AMP-binding domain-containing protein.
  
 
 0.633
CAOG_004362
Aspartate-semialdehyde dehydrogenase.
   
 
 0.608
CAOG_006399
Diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.592
CAOG_009057
ACT domain-containing protein; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.592
CAOG_008292
Ornithine decarboxylase 1; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.592
CAOG_003731
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.591
CAOG_004518
Isopropylmalate dehydrogenase.
   
  
 0.582
CAOG_002293
Adenosylmethionine decarboxylase 1.
     
 0.516
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.