STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_000577Peptidase_M28 domain-containing protein. (987 aa)    
Predicted Functional Partners:
CAOG_006161
Uncharacterized protein.
     
 0.596
CAOG_010209
Uncharacterized protein.
     
 0.596
CAOG_000006
Uncharacterized protein.
  
 0.578
CAOG_000336
Uncharacterized protein.
  
 0.578
CAOG_000569
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
  
 0.578
CAOG_004951
Acetylcholinesterase.
  
 0.578
CAOG_005396
Acetylcholinesterase.
  
 0.578
CAOG_005000
Roc domain-containing protein.
    
 0.534
CAOG_000430
V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.
   
 
 0.507
CAOG_005684
DHR-1 domain-containing protein; Belongs to the DOCK family.
     
 0.506
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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