STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_000745DUF4440 domain-containing protein. (142 aa)    
Predicted Functional Partners:
CAOG_001248
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.750
CAOG_010023
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
    
  0.737
CAOG_002930
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
    
  0.731
CAOG_002120
Aspartokinase.
    
  0.720
CAOG_005797
Ferredoxin 1-like protein.
    
  0.615
CAOG_003243
Ferredoxin.
    
  0.615
CAOG_000150
Cytochrome P450 sterol C-22 desaturase; Belongs to the cytochrome P450 family.
    
  0.536
CAOG_002316
Uncharacterized protein.
    
  0.536
CAOG_005441
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
  0.536
CAOG_005595
Cytochrome P450; Belongs to the cytochrome P450 family.
    
  0.536
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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