STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_000875PCI domain-containing protein. (248 aa)    
Predicted Functional Partners:
CAOG_000629
Cop9 complex subunit.
   
 0.997
CAOG_006885
Proteasome component region PCI.
   
 0.997
CAOG_003595
Constitutive photomorphogenic 9 complex chain AJH2.
    
 0.997
CAOG_005187
PCI domain-containing protein.
    
 0.996
CAOG_002163
Mov34/MPN/PAD-1 family protein.
    
 0.992
CAOG_007082
COP9 signalosome complex subunit 2.
    
 0.992
CAOG_006522
Ubiquitin-like domain-containing protein.
    
 0.897
CAOG_001275
Cullin 4; Belongs to the cullin family.
    
 0.874
CAOG_004868
RING-box protein 1.
   
 0.869
CAOG_004663
Eukaryotic translation initiation factor 3 subunit F; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
    
 0.847
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.