STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_001120Zinc finger protein. (178 aa)    
Predicted Functional Partners:
CAOG_000082
Uncharacterized protein.
   
 0.883
CAOG_003184
Ubiquitin-carboxyl extension.
    
  0.717
CAOG_003509
Ubiquitin/ribosomal protein S27a fusion protein.
    
  0.717
CAOG_004692
Uncharacterized protein.
   
 0.703
CAOG_003438
GTP-binding protein rab11.
   
 0.703
CAOG_001483
Uncharacterized protein.
   
 0.703
CAOG_005133
Uncharacterized protein.
   
 0.703
CAOG_007693
Rab31 protein.
   
 0.703
CAOG_008691
Ubiquitin-like domain-containing protein.
    
 0.664
CAOG_003260
Ubiquitin/60S ribosomal protein L40 fusion.
    
 0.664
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.