STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_001412Ribose-phosphate pyrophosphokinase 3; Belongs to the ribose-phosphate pyrophosphokinase family. (491 aa)    
Predicted Functional Partners:
CAOG_007138
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.854
CAOG_000638
Branched chain keto acid dehydrogenase E1 beta polypeptide.
   
 0.854
CAOG_000368
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.752
CAOG_009572
Uncharacterized protein.
   
 0.752
CAOG_000413
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
   
 0.752
CAOG_009710
Uncharacterized protein.
    
  0.729
CAOG_005419
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
 
 0.723
CAOG_001722
Thioredoxin reductase 3.
   
 0.722
CAOG_001302
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
 0.722
CAOG_007095
Dihydrolipoyl dehydrogenase.
   
 0.722
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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