STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_002362Uncharacterized protein. (427 aa)    
Predicted Functional Partners:
CAOG_001063
Endonuclease/Exonuclease/phosphatase.
   
 
 0.736
CAOG_005000
Roc domain-containing protein.
    
 0.671
CAOG_005850
CMGC/MAPK protein kinase.
   
 0.660
CAOG_008222
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.660
CAOG_004095
Mitogen-activated protein kinase.
   
 0.660
CAOG_002578
Mitogen-activated protein kinase.
   
 0.660
CAOG_000619
AGC/NDR/LATS protein kinase.
    
 0.646
CAOG_006161
Uncharacterized protein.
    
 0.623
CAOG_010209
Uncharacterized protein.
    
 0.623
CAOG_007738
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
  0.620
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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