CAOG_009815 protein (Capsaspora owczarzaki) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CAOG_009815

Uncharacterized protein. (311 aa)

Predicted Functional Partners:

CAOG_002597

0.830

CAOG_001380

0.764

CAOG_000845

0.757

CAOG_004171

0.757

CAOG_004192

0.757

CAOG_004537

0.757

CAOG_005017

0.751

CAOG_002303

0.751

CAOG_004474

0.732

CAOG_003574

0.732

Your Current Organism:

Capsaspora owczarzaki

NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAOG_000845	CAOG_001380	A0A0D2VHC5	A0A0D2U494	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Hsp70-like protein; Belongs to the heat shock protein 70 family.	0.801
CAOG_000845	CAOG_002303	A0A0D2VHC5	A0A0D2X1N5	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Na_H_antiporter domain-containing protein.	0.692
CAOG_000845	CAOG_002597	A0A0D2VHC5	A0A0D2VMP9	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Hsp97-like protein.	0.885
CAOG_000845	CAOG_003574	A0A0D2VHC5	A0A0D2WNH5	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Heat shock protein 90a.	0.862
CAOG_000845	CAOG_004474	A0A0D2VHC5	A0A0D2VRY1	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.862
CAOG_000845	CAOG_005017	A0A0D2VHC5	A0A0D2UGY5	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.722
CAOG_000845	CAOG_009815	A0A0D2VHC5	A0A0D2VT79	Heat shock protein 70; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.757
CAOG_001380	CAOG_000845	A0A0D2U494	A0A0D2VHC5	Hsp70-like protein; Belongs to the heat shock protein 70 family.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.801
CAOG_001380	CAOG_002303	A0A0D2U494	A0A0D2X1N5	Hsp70-like protein; Belongs to the heat shock protein 70 family.	Na_H_antiporter domain-containing protein.	0.669
CAOG_001380	CAOG_002597	A0A0D2U494	A0A0D2VMP9	Hsp70-like protein; Belongs to the heat shock protein 70 family.	Hsp97-like protein.	0.877
CAOG_001380	CAOG_003574	A0A0D2U494	A0A0D2WNH5	Hsp70-like protein; Belongs to the heat shock protein 70 family.	Heat shock protein 90a.	0.829
CAOG_001380	CAOG_004171	A0A0D2U494	A0A0D2VR97	Hsp70-like protein; Belongs to the heat shock protein 70 family.	Hsp70-like protein; Belongs to the heat shock protein 70 family.	0.801
CAOG_001380	CAOG_004192	A0A0D2U494	A0A0D2WQS5	Hsp70-like protein; Belongs to the heat shock protein 70 family.	Hsp70-like protein; Belongs to the heat shock protein 70 family.	0.803
CAOG_001380	CAOG_004474	A0A0D2U494	A0A0D2VRY1	Hsp70-like protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.829
CAOG_001380	CAOG_004537	A0A0D2U494	A0A0D2X370	Hsp70-like protein; Belongs to the heat shock protein 70 family.	Hsp70-like protein; Belongs to the heat shock protein 70 family.	0.818
CAOG_001380	CAOG_005017	A0A0D2U494	A0A0D2UGY5	Hsp70-like protein; Belongs to the heat shock protein 70 family.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.763
CAOG_001380	CAOG_009815	A0A0D2U494	A0A0D2VT79	Hsp70-like protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein.	0.764
CAOG_002303	CAOG_000845	A0A0D2X1N5	A0A0D2VHC5	Na_H_antiporter domain-containing protein.	Heat shock protein 70; Belongs to the heat shock protein 70 family.	0.692
CAOG_002303	CAOG_001380	A0A0D2X1N5	A0A0D2U494	Na_H_antiporter domain-containing protein.	Hsp70-like protein; Belongs to the heat shock protein 70 family.	0.669
CAOG_002303	CAOG_002597	A0A0D2X1N5	A0A0D2VMP9	Na_H_antiporter domain-containing protein.	Hsp97-like protein.	0.808