STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_007024Myo-inositol oxygenase. (293 aa)    
Predicted Functional Partners:
CAOG_000339
Mevalonate kinase.
   
 
 0.844
CAOG_004939
Oxidoreductase domain-containing protein, variant.
   
 
 0.842
CAOG_001597
Inositol-1-monophosphatase.
     
 0.809
CAOG_002058
Aldehyde reductase.
 
 
 
 0.779
CAOG_005049
Uncharacterized protein.
   
 
 0.752
CAOG_006621
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
     
 0.747
CAOG_007094
Zinc-containing alcohol dehydrogenase.
     
 0.745
CAOG_005028
Farnesyl-diphosphate farnesyltransferase 1.
     
 0.743
CAOG_005213
GFO_IDH_MocA domain-containing protein.
   
 
 0.584
CAOG_004483
NAD binding Rossmann fold oxidoreductase.
   
 
 0.584
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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