STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_007408Uncharacterized protein; Belongs to the complex I LYR family. (144 aa)    
Predicted Functional Partners:
CAOG_006008
Cysteine desulfurylase.
   
 0.997
CAOG_002445
Uncharacterized protein.
    
 0.992
CAOG_003846
NifU-like protein.
    
 0.991
CAOG_008030
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.928
CAOG_004104
Phosphoglycerate-bisphosphoglycerate mutase.
    
 0.869
CAOG_001865
Polygalacturonase.
    
 0.869
CAOG_003411
Uncharacterized protein.
    
 0.869
CAOG_007257
Cysteine desulfurase.
    
 0.865
CAOG_003080
Selenocysteine lyase.
    
 0.865
CAOG_005033
Aminotran_5 domain-containing protein.
    
 0.865
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.