STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_000498Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (347 aa)    
Predicted Functional Partners:
CAOG_008860
Uncharacterized protein.
  
 
 0.997
CAOG_003771
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.997
CAOG_001966
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
  
 0.997
CAOG_004629
50S ribosomal protein L15; Belongs to the universal ribosomal protein uL15 family.
  
 0.996
CAOG_000661
Ribosomal protein S16.
   
 
 0.996
CAOG_001447
Uncharacterized protein.
   
 
 0.996
CAOG_006246
Ribosomal protein L13.
  
 0.996
CAOG_001868
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.996
CAOG_003910
Uncharacterized protein.
   
 
 0.996
CAOG_004603
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.996
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.