STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_000690Phosducin domain-containing protein. (312 aa)    
Predicted Functional Partners:
CAOG_000482
Heterotrimeric G protein beta subunit 1.
    
 0.870
CAOG_002392
Guanine nucleotide-binding protein beta subunit.
    
 0.870
CAOG_005114
T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.
    
 0.779
CAOG_006369
Chaperonin epsilon subunit.
    
  0.734
CAOG_007327
Chaperonin subunit 2.
    
  0.720
CAOG_002611
T-complex protein 1 subunit delta.
    
  0.679
CAOG_000503
T-complex protein 1 subunit alpha.
    
  0.675
CAOG_005853
Chaperonin containing TCP1.
    
  0.675
CAOG_004316
Chaperonin containing TCP1 subunit 8.
    
  0.669
CAOG_007337
DUF4209 domain-containing protein.
    
 0.659
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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