STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_001005Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (782 aa)    
Predicted Functional Partners:
CAOG_002621
Calcium-binding protein p22.
   
 0.549
CAOG_009797
Uncharacterized protein.
   
 0.549
CAOG_005182
Notch1-induced protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.549
CAOG_005011
Calcium-binding protein NCS-1.
   
 0.547
CAOG_007467
Myosin alkali light chain 6.
   
 0.547
CAOG_000315
Calcineurin b subunit.
   
 0.547
CAOG_004169
Uncharacterized protein.
   
 0.547
CAOG_003917
Uncharacterized protein.
   
 0.547
CAOG_002694
Calmodulin; Belongs to the calmodulin family.
   
 0.547
CAOG_005229
Allograft inflammatory factor.
   
 0.547
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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