STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_001246Biotin synthase. (419 aa)    
Predicted Functional Partners:
CAOG_004181
Uncharacterized protein.
 
 
 0.978
CAOG_004880
Ornithine aminotransferase.
 
 
 
 0.942
CAOG_006935
Acetylornithine and succinylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 
 0.921
CAOG_008906
BPL/LPL catalytic domain-containing protein.
  
 
 0.887
CAOG_000401
8-amino-7-oxononanoate synthase.
 
  
 0.821
CAOG_001730
Uroporphyrinogen decarboxylase.
  
 
 0.780
CAOG_002087
Uncharacterized protein.
   
 
 0.719
CAOG_004431
Migration-inducing protein 4.
 
  
 0.712
CAOG_006687
Carbamoyl-phosphate synthase large subunit.
  
 
 0.710
CAOG_005214
Aspartate transcarbamylase.
  
 
 0.710
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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