STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_009365Uncharacterized protein. (2460 aa)    
Predicted Functional Partners:
CAOG_003781
USP domain-containing protein.
    
  0.627
CAOG_008633
Uncharacterized protein.
   
 0.617
CAOG_002800
PDZ domain-containing protein.
   
 0.617
CAOG_004665
UCH domain-containing protein.
    
  0.600
CAOG_006812
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.598
CAOG_006313
Valosin-containing protein; Belongs to the AAA ATPase family.
   
 0.590
CAOG_002951
Uncharacterized protein.
   
 0.590
CAOG_002333
AAA family ATPase.
   
 0.590
CAOG_007893
ATPase.
   
 0.590
CAOG_005814
Uncharacterized protein.
   
 0.579
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.