STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_001048Uncharacterized protein. (418 aa)    
Predicted Functional Partners:
CAOG_004494
Uncharacterized protein.
  
 
 
 0.937
CAOG_001240
Spindle pole body component.
    
 0.820
CAOG_001949
Uncharacterized protein.
    
 0.811
CAOG_004944
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.783
CAOG_006526
Tubulin.
    
 0.758
CAOG_003785
Spindle pole body component.
    
 0.721
CAOG_006377
Biotin/lipoate A/B protein ligase.
    
   0.689
CAOG_007105
Pre-mRNA splicing factor prp8.
    
   0.689
CAOG_003351
Methylcrotonoyl-Coenzyme A carboxylase 2.
   
 0.683
CAOG_007769
Carboxyl transferase.
   
 0.683
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.