STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_002396General transcription factor IIH. (381 aa)    
Predicted Functional Partners:
CAOG_002212
BSD domain-containing protein.
    
 0.998
CAOG_002231
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
 0.998
CAOG_001357
General transcription factor IIH subunit.
   
 0.998
CAOG_008527
Helicase ATP-binding domain-containing protein.
    
 0.998
CAOG_001914
CMGC/CDK/CDK7 protein kinase; Belongs to the protein kinase superfamily.
    
 0.996
CAOG_004743
MAT1 domain-containing protein.
    
 0.996
CAOG_004347
Uncharacterized protein.
   
 0.995
CAOG_000449
TFA2_Winged_2 domain-containing protein.
    
 0.993
CAOG_007235
TFIIE domain-containing protein.
   
 0.993
CAOG_003348
Transcription initiation factor IIB.
    
 0.981
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.