STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_002609Xpo1 protein. (1406 aa)    
Predicted Functional Partners:
CAOG_006623
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.991
CAOG_006026
Uncharacterized protein.
    
 0.990
CAOG_005880
Small GTPase Ran binding protein 1.
   
 
 0.963
CAOG_004882
Snurportin-1.
    
 
 0.961
CAOG_001016
Uncharacterized protein.
    
 
 0.904
CAOG_009723
Uncharacterized protein.
    
 
 0.904
CAOG_000849
Uncharacterized protein.
    
 0.894
CAOG_006030
Uncharacterized protein.
    
 0.865
CAOG_000617
Peptidase S59 domain-containing protein.
    
 0.865
CAOG_005333
Uncharacterized protein.
    
 0.821
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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