STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_002558COMM domain-containing protein. (84 aa)    
Predicted Functional Partners:
CAOG_007970
COMM domain-containing protein 9.
    
 0.978
CAOG_010128
COMM domain-containing protein.
   
 0.912
CAOG_001383
MDRWMS2.
   
 0.905
CAOG_007510
COBW domain-containing protein.
   
 0.897
CAOG_000788
HCaRG family protein.
   
 0.894
CAOG_008526
Uncharacterized protein.
    
 0.875
CAOG_005613
COMM domain-containing protein 7.
   
0.855
CAOG_003387
COMM domain-containing protein.
    
 0.846
CAOG_002053
COMM domain-containing protein.
    
 0.845
CAOG_001051
HCaRG domain-containing protein.
    
 0.833
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.