STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_003896Uncharacterized protein. (473 aa)    
Predicted Functional Partners:
CAOG_004809
Rab8a protein.
    
 0.873
CAOG_002771
Uncharacterized protein.
   
 0.802
CAOG_003344
Uncharacterized protein.
   
 0.778
CAOG_005123
Vinculin.
   
 0.778
CAOG_000257
Uncharacterized protein.
    
  0.769
CAOG_003740
TKL protein kinase.
    
  0.769
CAOG_005734
Uncharacterized protein.
    
  0.769
CAOG_005350
Uncharacterized protein.
    
  0.769
CAOG_006107
Parkinson disease 7 domain-containing protein 1.
   
 0.720
CAOG_003033
Beta-centracetin.
    
 0.693
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.