STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_004052Uncharacterized protein. (601 aa)    
Predicted Functional Partners:
CAOG_001658
tRNA_int_end_N2 domain-containing protein.
    
 0.965
CAOG_004278
Uncharacterized protein.
    
   0.934
CAOG_002022
tRNA_int_endo domain-containing protein.
    
 0.923
CAOG_001837
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.
    
 0.843
CAOG_008784
Uncharacterized protein.
    
   0.668
CAOG_004916
Uncharacterized protein.
    
   0.668
CAOG_003518
tRNA phosphotransferase 1.
      
 0.450
CAOG_009259
Uncharacterized protein.
      
 0.449
CAOG_007173
O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis.
      
 0.412
CAOG_007407
tRNA dihydrouridine synthase Dus2.
   
    0.406
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.