STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_003563Ubiquitin carboxyl-terminal hydrolase. (950 aa)    
Predicted Functional Partners:
CAOG_000275
WD_REPEATS_REGION domain-containing protein.
    
 0.995
CAOG_002337
Uncharacterized protein.
    
 0.969
CAOG_004987
Uncharacterized protein.
   
 0.942
CAOG_008398
Uncharacterized protein.
    
 0.879
CAOG_005121
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.873
CAOG_006534
Uncharacterized protein.
    
 0.870
CAOG_003509
Ubiquitin/ribosomal protein S27a fusion protein.
    
  0.867
CAOG_002730
Fanconi anemia.
     
 0.842
CAOG_007979
ATPase_AAA_core domain-containing protein.
   
 0.791
CAOG_003184
Ubiquitin-carboxyl extension.
    
  0.774
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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