STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_004243STAM binding protein. (544 aa)    
Predicted Functional Partners:
CAOG_001212
UBX domain-containing protein.
   
  0.954
CAOG_008398
Uncharacterized protein.
    
 0.952
CAOG_003509
Ubiquitin/ribosomal protein S27a fusion protein.
   
 0.942
CAOG_000354
NAK protein kinase.
    
  0.878
CAOG_001912
Proteasome regulatory particle subunit p44S10.
   
 0.871
CAOG_005890
Proteasome 26S subunit.
   
 0.870
CAOG_007762
Uncharacterized protein.
    
 0.869
CAOG_007755
Uncharacterized protein.
    
 0.869
CAOG_008097
Proteasome 26S non-ATPase subunit 12.
   
 0.869
CAOG_000927
Proteasome 54kD subunit-PA.
   
 0.861
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.