STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_004722Sterol desaturase; Belongs to the sterol desaturase family. (285 aa)    
Predicted Functional Partners:
CAOG_005028
Farnesyl-diphosphate farnesyltransferase 1.
  
 0.955
CAOG_007134
C-4 methylsterol oxidase; Belongs to the sterol desaturase family.
   
 0.945
CAOG_005332
Sterol desaturase; Belongs to the sterol desaturase family.
   
 0.945
CAOG_004522
Hydroxysteroid dehydrogenase 7.
   
 0.943
CAOG_001478
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 0.907
CAOG_004184
Uncharacterized protein.
   
 
 0.874
CAOG_007273
Sterol C-14 reductase.
   
 0.874
CAOG_000613
Sigma 1-type opioid receptor.
   
 0.867
CAOG_004302
C-8 sterol isomerase erg-1.
   
 0.867
CAOG_001185
Uncharacterized protein.
   
 0.859
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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