STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_004246Uncharacterized protein. (258 aa)    
Predicted Functional Partners:
CAOG_006704
Iron-containing alcohol dehydrogenase.
  
 0.909
CAOG_001457
MADS box protein.
    
 0.908
CAOG_007339
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.809
CAOG_006388
SCP2 sterol transfer family protein.
   
 0.685
CAOG_000210
Diaminopimelate epimerase.
    
  0.614
CAOG_004108
L-threonine ammonia-lyase.
  
 
  0.609
CAOG_005372
Threonine dehydratase.
  
  0.609
CAOG_007178
Pyridoxal-5'-phosphate-dependent protein beta subunit.
  
  0.609
CAOG_000248
Ilvbl protein; Belongs to the TPP enzyme family.
    
 0.595
CAOG_004574
Thiamine pyrophosphate enzyme.
    
 0.595
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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