STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_005082RPA_C domain-containing protein. (242 aa)    
Predicted Functional Partners:
CAOG_002972
Fanconi anemia.
   
 0.999
CAOG_003523
3'-5' exonuclease domain-containing protein.
   
 0.999
CAOG_003001
Replication protein A.
   
 0.997
CAOG_007088
Uncharacterized protein.
    
 0.977
CAOG_003918
Uncharacterized protein.
   
 
 0.959
CAOG_009113
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.943
CAOG_005121
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.936
CAOG_007825
DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family.
   
 0.935
CAOG_005936
DNA replication factor C subunit Rfc4.
   
 0.927
CAOG_002341
DUF1767 domain-containing protein.
    
 0.919
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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