STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_006792Uncharacterized protein. (160 aa)    
Predicted Functional Partners:
CAOG_004241
Uncharacterized protein.
   
 0.997
CAOG_003073
Uncharacterized protein.
   
 0.991
CAOG_009779
Replication factor C subunit 2/4.
   
 0.923
CAOG_000962
Replication factor C 5.
   
 0.921
CAOG_000216
Replication factor C subunit.
   
 0.868
CAOG_005936
DNA replication factor C subunit Rfc4.
   
 0.861
CAOG_007029
DNA polymerase epsilon catalytic subunit.
    
 0.853
CAOG_006005
Uncharacterized protein.
   
 0.799
CAOG_007120
Helicase ATP-binding domain-containing protein.
    
 
 0.762
CAOG_000958
TIMELESS domain-containing protein.
    
 
 0.741
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.