STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_007534G-patch domain-containing protein. (1231 aa)    
Predicted Functional Partners:
CAOG_000793
Uncharacterized protein.
    
 0.893
CAOG_007630
Mitogen-activated protein kinase organizer 1.
    
 
 0.876
CAOG_001424
Pre-mRNA-splicing factor syf2.
    
  0.849
CAOG_008207
Coiled-coil domain containing 94.
    
  0.819
CAOG_002659
PWI domain-containing protein.
     
 0.805
CAOG_004406
Pre-mRNA splicing factor prp17.
    
  0.797
CAOG_009774
Uncharacterized protein.
    
  0.788
CAOG_004271
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.788
CAOG_000360
SKIV2L2 protein.
   
 0.785
CAOG_006485
Peptidyl-prolyl cis-trans isomerase-like 2.
   
  0.780
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.