STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_007140Isocitrate lyase. (549 aa)    
Predicted Functional Partners:
CAOG_007141
Malate synthase; Belongs to the malate synthase family.
 
 
 0.997
CAOG_004553
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.898
CAOG_002027
Citrate synthase; Belongs to the citrate synthase family.
  
 0.897
CAOG_004139
Citrate synthase; Belongs to the citrate synthase family.
  
 0.897
CAOG_004092
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.894
CAOG_003060
Peroxisomal glycolate oxidase.
   
 
 0.848
CAOG_004140
DAO domain-containing protein.
  
 
 0.818
CAOG_008680
Uncharacterized protein.
   
 0.798
CAOG_001248
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.797
CAOG_007613
Malate dehydrogenase.
  
 0.789
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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