STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_007695NmrA domain-containing protein. (292 aa)    
Predicted Functional Partners:
CAOG_006337
Cytochrome b5 reductase 4.
   
  0.763
CAOG_000964
Glyceraldehyde-3-phosphate dehydrogenase.
    
 0.633
CAOG_000511
SAM domain-containing protein.
    
 0.580
CAOG_008066
Thymidine kinase.
     
 0.570
CAOG_002176
Ras-like protein Rab-11B.
    
 0.568
CAOG_000725
Thymidylate synthase.
    
  0.560
CAOG_002886
Epoxide hydrolase 2.
  
 
 0.557
CAOG_003126
Ras-like protein Rab-14.
    
 0.557
CAOG_007609
Ras-like protein Rab-2A.
    
 0.549
CAOG_004809
Rab8a protein.
    
 0.528
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.