STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_007301Adenosylhomocysteinase. (472 aa)    
Predicted Functional Partners:
CAOG_004571
5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase.
 
 
 0.967
CAOG_002686
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.886
CAOG_001700
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.862
CAOG_010009
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.862
CAOG_010010
Prolyl-tRNA synthetase.
  
 
 0.862
CAOG_000479
Cysteine synthase A.
  
 0.826
CAOG_006730
Cysteine synthase.
  
 0.826
CAOG_004681
Cystathionine beta-lyase.
  
 0.820
CAOG_003984
Cystathionine gamma-synthase.
  
 0.820
CAOG_007028
Rhodanese domain-containing protein.
     
 0.808
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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