STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_000113Transmembrane protein 49. (581 aa)    
Predicted Functional Partners:
CAOG_007333
Beclin.
    
 0.879
CAOG_002238
Phosphoinositide-3-kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.499
CAOG_003919
Ubiquitin-like protein ATG12.
      
 0.485
CAOG_000931
Transmembrane protein 41B.
    
 
 0.480
CAOG_001880
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
      
 0.470
CAOG_004292
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.451
CAOG_006090
WD repeat domain phosphoinositide-interacting protein 2.
      
 0.439
CAOG_001304
Autophagy-related protein 3.
   
  
 0.431
CAOG_003376
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for autophagy.
   
  
 0.427
CAOG_007700
Autophagy-related protein.
   
  
 0.419
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.