STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_000364AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family. (424 aa)    
Predicted Functional Partners:
CAOG_000354
NAK protein kinase.
   
 0.975
CAOG_007402
AP-1 complex subunit gamma.
    
 0.967
CAOG_001510
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.905
CAOG_003603
AP complex subunit beta.
    
 0.902
CAOG_003591
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 0.902
CAOG_005352
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
 0.879
CAOG_003885
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.859
CAOG_000437
MBLVR.
   
 0.852
CAOG_003366
Epsilon-adaptin.
    
 0.848
CAOG_004303
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.812
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.