STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_001028Uncharacterized protein. (738 aa)    
Predicted Functional Partners:
CAOG_003523
3'-5' exonuclease domain-containing protein.
   
 0.975
CAOG_004962
Uncharacterized protein.
   
 0.843
CAOG_003231
Double-strand break repair protein MRE11A; Belongs to the MRE11/RAD32 family.
   
 0.829
CAOG_001652
Uncharacterized protein.
   
 0.828
CAOG_003261
Uncharacterized protein.
    
 0.808
CAOG_009113
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.798
CAOG_008030
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.798
CAOG_003258
Zinc ion binding protein.
    
 0.794
CAOG_008500
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.791
CAOG_001280
NYN domain-containing protein.
    
 0.780
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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