CAOG_001362 protein (Capsaspora owczarzaki) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CAOG_001362

Mixed-lineage leukemia protein. (1884 aa)

Predicted Functional Partners:

CAOG_001525

0.980

CAOG_000421

0.979

CAOG_004903

0.913

CAOG_000702

0.849

CAOG_002790

0.849

CAOG_001587

0.844

CAOG_005674

0.840

CAOG_008491

0.817

CAOG_006889

0.805

CAOG_004978

0.805

Your Current Organism:

Capsaspora owczarzaki

NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAOG_000421	CAOG_000702	A0A0D2WIH5	A0A0D2VGZ9	WD_REPEATS_REGION domain-containing protein.	Heat shock protein 40.	0.732
CAOG_000421	CAOG_001362	A0A0D2WIH5	A0A0D2X105	WD_REPEATS_REGION domain-containing protein.	Mixed-lineage leukemia protein.	0.979
CAOG_000421	CAOG_001525	A0A0D2WIH5	A0A0D2WJG6	WD_REPEATS_REGION domain-containing protein.	Ash2-like protein.	0.998
CAOG_000421	CAOG_002790	A0A0D2WIH5	A0A0D2WLX9	WD_REPEATS_REGION domain-containing protein.	DnaJ subfamily B member 5.	0.732
CAOG_000421	CAOG_004903	A0A0D2WIH5	E9CA03	WD_REPEATS_REGION domain-containing protein.	E1A binding protein p300, variant.	0.655
CAOG_000421	CAOG_004978	A0A0D2WIH5	A0A0D2X3H5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.947
CAOG_000421	CAOG_006889	A0A0D2WIH5	A0A0D2UNP1	WD_REPEATS_REGION domain-containing protein.	WD repeat-containing protein 5.	0.947
CAOG_000421	CAOG_008491	A0A0D2WIH5	A0A0D2WIU0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.775
CAOG_000702	CAOG_000421	A0A0D2VGZ9	A0A0D2WIH5	Heat shock protein 40.	WD_REPEATS_REGION domain-containing protein.	0.732
CAOG_000702	CAOG_001362	A0A0D2VGZ9	A0A0D2X105	Heat shock protein 40.	Mixed-lineage leukemia protein.	0.849
CAOG_000702	CAOG_001525	A0A0D2VGZ9	A0A0D2WJG6	Heat shock protein 40.	Ash2-like protein.	0.717
CAOG_000702	CAOG_004978	A0A0D2VGZ9	A0A0D2X3H5	Heat shock protein 40.	Uncharacterized protein.	0.576
CAOG_000702	CAOG_006889	A0A0D2VGZ9	A0A0D2UNP1	Heat shock protein 40.	WD repeat-containing protein 5.	0.576
CAOG_001362	CAOG_000421	A0A0D2X105	A0A0D2WIH5	Mixed-lineage leukemia protein.	WD_REPEATS_REGION domain-containing protein.	0.979
CAOG_001362	CAOG_000702	A0A0D2X105	A0A0D2VGZ9	Mixed-lineage leukemia protein.	Heat shock protein 40.	0.849
CAOG_001362	CAOG_001525	A0A0D2X105	A0A0D2WJG6	Mixed-lineage leukemia protein.	Ash2-like protein.	0.980
CAOG_001362	CAOG_001587	A0A0D2X105	A0A0D2X161	Mixed-lineage leukemia protein.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.844
CAOG_001362	CAOG_002790	A0A0D2X105	A0A0D2WLX9	Mixed-lineage leukemia protein.	DnaJ subfamily B member 5.	0.849
CAOG_001362	CAOG_004903	A0A0D2X105	E9CA03	Mixed-lineage leukemia protein.	E1A binding protein p300, variant.	0.913
CAOG_001362	CAOG_004978	A0A0D2X105	A0A0D2X3H5	Mixed-lineage leukemia protein.	Uncharacterized protein.	0.805