STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_003187ANK_REP_REGION domain-containing protein. (131 aa)    
Predicted Functional Partners:
CAOG_001212
UBX domain-containing protein.
    
 0.936
CAOG_000240
RPN13_C domain-containing protein.
    
 0.843
CAOG_009462
Ubiquitin carboxyl-terminal hydrolase.
    
 0.801
CAOG_001154
26S proteasome non-ATPase regulatory subunit 11.
    
 0.790
CAOG_003181
Proteasome 26S subunit; Belongs to the proteasome subunit S1 family.
    
 0.788
CAOG_000927
Proteasome 54kD subunit-PA.
   
 0.780
CAOG_000480
Ubiquitin carboxyl-terminal hydrolase.
    
 0.775
CAOG_004724
Proteasome 26S ATPase subunit 3; Belongs to the AAA ATPase family.
   
 0.767
CAOG_001890
Proteasome 26S non-ATPase subunit 7.
   
 0.766
CAOG_001838
Tat-binding protein 10; Belongs to the AAA ATPase family.
    
 0.765
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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