STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_004212Uncharacterized protein. (432 aa)    
Predicted Functional Partners:
CAOG_007277
Ribosomal protein L4/L1e.
   
 
 0.963
CAOG_006827
39S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.961
CAOG_006246
Ribosomal protein L13.
   
 
 0.960
CAOG_002217
Uncharacterized protein.
   
 
 0.960
CAOG_006952
Uncharacterized protein.
   
 
 0.957
CAOG_007374
Uncharacterized protein.
   
   0.957
CAOG_004101
Uncharacterized protein.
   
   0.952
CAOG_001631
Uncharacterized protein.
   
 
 0.951
CAOG_001868
Ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
   0.950
CAOG_003771
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.948
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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