STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_004603Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family. (207 aa)    
Predicted Functional Partners:
CAOG_001447
Uncharacterized protein.
  
 
 0.999
CAOG_008860
Uncharacterized protein.
  
 
 0.999
CAOG_000486
RIBOSOMAL_L9 domain-containing protein.
  
 
 0.999
CAOG_003910
Uncharacterized protein.
  
 
 0.999
CAOG_007374
Uncharacterized protein.
  
 
 0.999
CAOG_000618
Ribosomal protein L7.
   
 
 0.998
CAOG_000830
Ribosomal protein S3.
   
 
 0.998
CAOG_002488
Ribosomal protein L5.
   
 
 0.998
CAOG_003866
60S ribosomal protein L8.
   
 
 0.998
CAOG_005200
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.998
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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