STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_006277Uncharacterized protein. (1226 aa)    
Predicted Functional Partners:
CAOG_002506
U3 snoRNP-associated protein Utp7.
   
 0.999
CAOG_005638
Sas10 domain-containing protein.
   
 0.999
CAOG_000770
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
CAOG_001339
DRIM domain-containing protein.
   
 0.999
CAOG_006972
Uncharacterized protein.
   
 0.999
CAOG_005142
CBF domain-containing protein.
   
 0.999
CAOG_007936
Uncharacterized protein.
   
 0.999
CAOG_002524
C2f protein.
   
 0.998
CAOG_007245
Ribosome biogenesis protein BMS1.
   
 
 0.998
CAOG_008091
WD_REPEATS_REGION domain-containing protein.
   
 0.997
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.