STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_006362Cullin-associated and neddylation-dissociated 1. (1261 aa)    
Predicted Functional Partners:
CAOG_001275
Cullin 4; Belongs to the cullin family.
   
 0.953
CAOG_004868
RING-box protein 1.
    
 0.948
CAOG_004201
Cullin 3; Belongs to the cullin family.
   
 0.935
CAOG_004624
Cullin 1; Belongs to the cullin family.
   
 0.935
CAOG_000038
Cullin 1a; Belongs to the cullin family.
    
 0.910
CAOG_006179
Skp1; Belongs to the SKP1 family.
    
 0.814
CAOG_001326
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
    
 0.804
CAOG_006522
Ubiquitin-like domain-containing protein.
    
 0.770
CAOG_005287
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
     
 0.768
CAOG_007250
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.759
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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