STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_007410RNA-binding protein PNO1. (302 aa)    
Predicted Functional Partners:
CAOG_000481
Bystin.
   
 0.940
CAOG_005863
Tsr1 protein.
   
 0.927
CAOG_003005
Ribosome biogenesis protein Nob1; Belongs to the NOB1 family.
   
 0.924
CAOG_002713
Atypical/RIO/RIO2 protein kinase.
   
 0.909
CAOG_005508
Uncharacterized protein.
   
 0.909
CAOG_003011
S4 RNA-binding domain-containing protein.
   
 0.901
CAOG_000476
Methyltransferase.
   
 0.878
CAOG_000662
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.866
CAOG_000830
Ribosomal protein S3.
   
 0.860
CAOG_005614
WD repeat-containing protein SAZD.
 
 
 
 0.856
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.