STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAOG_008024Uncharacterized protein. (1388 aa)    
Predicted Functional Partners:
CAOG_006353
Uncharacterized protein.
  
0.995
CAOG_001224
Uncharacterized protein.
   
 0.994
CAOG_001618
Adaptor protein complex AP-2; Belongs to the adaptor complexes medium subunit family.
    
 0.990
CAOG_003603
AP complex subunit beta.
    
 0.986
CAOG_003591
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
    
 0.986
CAOG_005459
Uncharacterized protein.
    
 0.986
CAOG_004772
50S ribosomal protein L27.
    
 0.986
CAOG_000917
Adaptin ear-binding coat-associated protein 2.
    
 0.984
CAOG_003875
WH2 domain-containing protein.
    
 0.982
CAOG_007738
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.981
Your Current Organism:
Capsaspora owczarzaki
NCBI taxonomy Id: 595528
Other names: C. owczarzaki ATCC 30864, Capsaspora owczarzaki ATCC 30864
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