STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW49_23750Unannotated protein. (78 aa)    
Predicted Functional Partners:
CQW49_23470
Unannotated protein.
  
 
 0.911
CQW49_11655
Unannotated protein; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.874
CQW49_17665
Unannotated protein.
  
 
 0.840
ctaD
Unannotated protein; Belongs to the heme-copper respiratory oxidase family.
    
   0.815
CQW49_23740
Unannotated protein.
  
  
 0.808
CQW49_04335
Unannotated protein.
   
 0.795
CQW49_23755
Unannotated protein.
  
   0.793
nuoC
Unannotated protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
   
 0.791
CQW49_23760
Unannotated protein.
  
   0.782
CQW49_23745
Unannotated protein.
       0.778
Your Current Organism:
Methylosinus trichosporium
NCBI taxonomy Id: 595536
Other names: M. trichosporium OB3b, Methylosinus trichosporium OB3b, Methylosinus trichosporium str. OB3b, Methylosinus trichosporium strain OB3b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.