STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQW49_21805Unannotated protein. (593 aa)    
Predicted Functional Partners:
CQW49_21155
Unannotated protein.
 
     0.926
CQW49_01945
Unannotated protein; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.920
CQW49_17880
Unannotated protein.
 
 
0.876
CQW49_05725
Unannotated protein.
 
 
 0.849
CQW49_01555
Unannotated protein.
 
 
 0.755
CQW49_17885
Unannotated protein.
 
 
 0.718
CQW49_00685
Unannotated protein.
 
 0.715
CQW49_21800
Unannotated protein.
  
   0.648
CQW49_17025
Unannotated protein.
 
 
   0.625
CQW49_00945
Unannotated protein.
 
 
 0.586
Your Current Organism:
Methylosinus trichosporium
NCBI taxonomy Id: 595536
Other names: M. trichosporium OB3b, Methylosinus trichosporium OB3b, Methylosinus trichosporium str. OB3b, Methylosinus trichosporium strain OB3b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.